epsic_tools package

Subpackages

• epsic_tools.signals package
  • Module contents
• epsic_tools.toolbox package
  • Submodules
  • epsic_tools.toolbox.define_probe_function module
  • epsic_tools.toolbox.make_merlin_mask module
  • epsic_tools.toolbox.make_merlin_mask_test module
  • epsic_tools.toolbox.ptycho_utils module
  • epsic_tools.toolbox.radial_profile module
  • epsic_tools.toolbox.sim_utils module
  • epsic_tools.toolbox.warp_3d module
  • Module contents

Submodules

epsic_tools.api module

Created on Fri Feb 14 14:46:57 2020

@author: gys37319

epsic_tools.build_params module

Created on Fri Feb 14 13:51:27 2020

@author: gys37319

class epsic_tools.build_params.NestedDefaultDict(*args, **kwargs)

Bases: collections.defaultdict

Initialisation of nested dictionary

epsic_tools.build_params.init_ptyrex()

Builds a dictionary of default parameters required for a ptyrex json file

params : dict of parameters

epsic_tools.ptychography2D module

Created on Fri Feb 14 13:37:55 2020

@author: gys37319

class epsic_tools.ptychography2D.Ptychography2D

Bases: object

Ptychography object

get_base_dir()

get_convergence()

get_data_key()

get_data_path()

get_dead_px_flag()

get_dead_px_path()

get_decay()

get_defocus()

get_detector_bin()

get_detector_crop()

get_detector_min_max()

get_detector_optic_axis()

get_detector_pos()

get_energy()

get_experiment_ID()

get_flat_field_flag()

get_flat_field_path()

get_gpu_flag()

get_interaction()

get_iterations()

get_load_data_flag()

get_load_object_flag()

get_load_object_path()

get_load_probe_flag()

get_load_probe_path()

get_n_cores()

get_probe_alpha()

get_probe_start()

get_px_pitch(val)

get_save_dir()

get_save_interval()

get_save_prefix()

get_scan_refine_start()

get_scan_region(val)

get_scan_rotation()

get_scan_size()

get_scan_step()

get_source_modes()

load_recon(fn)

load_series(pn, crop_to, sort_by='rot', blur=0, verbose=False, plot_me=True)

save_json(file_path)

set_base_dir(val)

set_convergence(val)

set_data_key(val)

set_data_path(val)

set_dead_px_flag(val)

set_dead_px_path(val)

set_decay(val)

set_defocus(val)

set_detector_bin(val)

set_detector_crop(val)

set_detector_min_max(val)

set_detector_optic_axis(val)

set_detector_pos(val)

set_energy(val)

set_experiment_ID(val)

set_flat_field_flag(val)

set_flat_field_path(val)

set_gpu_flag(val)

set_interaction(val)

set_iterations(val)

set_load_data_flag(val)

set_load_object_flag(val)

set_load_object_path(val)

set_load_probe_flag(val)

set_load_probe_path(val)

set_n_cores(val)

set_probe_alpha(val)

set_probe_start(val)

set_px_pitch(val)

set_save_dir(val)

set_save_interval(val)

set_save_prefix(val)

set_scan_refine_start(val)

set_scan_region(val)

set_scan_rotation(val)

set_scan_size(val)

set_scan_step(val)

set_source_modes(val)

epsic_tools.ptychography2D.is_number(s)

checks if input is a number

s: input

True or False

Module contents